Research Articles
Collection of Research Articles
- Verification of systems biology research in the age of collaborative competition
- Nature Biotechnology 29, 811–815 (2011)
- OpenFreezer: a reagent information management software system
- Nature Methods 8, 612–613 (2011)
- Response to Comment on “Positive Selection of Tyrosine Loss in Metazoan Evolution”
- Science 20 May 2011: Vol. 332 no. 6032 p. 917
- Kinome-wide Decoding of Network-Attacking Mutations Rewiring Cancer Signaling.
- Cell. 2015 Sep 16. pii: S0092-8674(15)01108-3. doi: 10.1016/j.cell.2015.08.056.
- Unmasking Determinants of Specificity in the Human Kinome.
- Cell. 2015 Sep 16. pii: S0092-8674(15)01109-5. doi: 10.1016/j.cell.2015.08.057.
- Pathway and network analysis of cancer genomes.
- Nature Methods. 2015 Jun 30;12(7):615-21.
- The hypoxic cancer secretome induces pre-metastatic bone lesions through lysyl oxidase
- Nature. 2015 Jun 4;522(7554):106-10.
- Integrative analysis of kinase networks in TRAIL-induced apoptosis provides a source of potential targets for combination therapy
- Science Signaling, 7 April 2015 Vol. 8, Issue 371, p. rs3
- PhD thesis (Rune Linding)
- EMBL April 2004.
- Cell-Specific Information Processing in Segregating Cell Populations
- In this Research Article published in Science, we provide the first systems- and cell-specific network models of contact-initiated signaling between two distinct cell types.
- Systematic discovery of in vivo phosphorylation networks.
- Cell. 2007 Jun 29;129(7):1415-26. Epub 2007 Jun 14.
- NetworKIN: a resource for exploring cellular phosphorylation networks.
- Nucleic Acids Res. 2008 Jan;36(Database issue):D695-9. Epub 2007 Nov 2.
- Linear motif atlas for phosphorylation-dependent signaling.
- Sci Signal. 2008 Sep 2;1(35):ra2.
- Phosphorylation networks regulating JNK activity in diverse genetic backgrounds.
- Science. 2008 Oct 17;322(5900):453-6.
- Dynamic modularity in protein interaction networks predicts breast cancer outcome.
- Nat Biotechnol. 2009 Feb;27(2):199-204. Epub 2009 Feb 1.
- Dissecting the interface between signaling and transcriptional regulation in human B cells.
- Pac Symp Biocomput. 2009:264-75.
- Positive selection of tyrosine loss in metazoan evolution.
- Science. 2009 Sep 25;325(5948):1686-8. Epub 2009 Jul 9.
- Comparative analysis reveals conserved protein phosphorylation networks implicated in multiple diseases.
- Sci Signal. 2009 Jul 28;2(81):ra39.
- Phosphorylation dynamics during early differentiation of human embryonic stem cells.
- Cell Stem Cell. 2009 Aug 7;5(2):214-26.
- ELM: the status of the 2010 eukaryotic linear motif resource.
- Nucleic Acids Res. 2009 Nov 17. [Epub ahead of print]
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